RetrogeneDB ID: | retro_etel_2128 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_70281:45..483(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ATP5G2 | ||
Ensembl ID: | ENSETEG00000005968 | ||
Aliases: | None | ||
Description: | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9) [Source:HGNC Symbol;Acc:842] |
Percent Identity: | 76.67 % |
Parental protein coverage: | 94.27 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | TAPHPLKMYACAKFVSTPSLVRSTSQLLSRPLSVLVQKRPETLSDERFSSLTAPRSQTSLVPSRSFQTST |
T.P..LKMYA..KFVST.SL.RSTSQLL..PL.VLVQ..PETL.DE.FSSLTAPRS.TSL.PS.SF..ST | |
Retrocopy | TLPSSLKMYAYVKFVSTLSLIRSTSQLLT*PLFVLVQIQPETLTDEHFSSLTAPRSLTSLIPSHSF*AST |
Parental | VSRDIDTAAKFIGAGAATVGVAG-SGAGIGTVF-GSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCL |
.SRDIDTAAKFIGAGAATVGVAG.SGAGIG.V..GS.I.GY.R.PSLKQQLFSY.ILGFA.....GLFCL | |
Retrocopy | ISRDIDTAAKFIGAGAATVGVAG>SGAGIGSVL<GSVILGYTRTPSLKQQLFSYIILGFAFLK--GLFCL |
Parental | MVAFLILFAM |
MVAFLIL.AM | |
Retrocopy | MVAFLILLAM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |