RetrogeneDB ID: | retro_dord_410 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_172441:2..317(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Acp1 | ||
Ensembl ID: | ENSDORG00000016469 | ||
Aliases: | None | ||
Description: | acid phosphatase 1, soluble [Source:MGI Symbol;Acc:MGI:87881] |
Percent Identity: | 58.1 % |
Parental protein coverage: | 66.46 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | DWAIDSGAVSDWNVGRAPDPRAMSCLRNHDISTAHKARQVTKEDFATFDYILCMDESNLRDLNRKSNQVK |
.W.I...A.S...VG..PD....S..R.H.IS..H.A.QVTK..FA.F..ILCMDESNLR.LNR.SNQ.K | |
Retrocopy | NWRIARMAISI*GVGNPPDYPEQSYMRKHGISMSHVA*QVTKKEFAPFHCILCMDESNLRNLNRNSNQGK |
Parental | NCKAKIELLGSYDPHKQLIIEDPYYGNDSDFELVY |
NCKAK.E.LGS..P.K..IIE.PY.G.DS.F.L.Y | |
Retrocopy | NCKAKFECLGSSNPQK*HIIEYPY*GKDSNFRLAY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |