RetrogeneDB ID: | retro_tsyr_1482 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_45971:5433..5860(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ACP1 | ||
Ensembl ID: | ENSTSYG00000004864 | ||
Aliases: | None | ||
Description: | acid phosphatase 1, soluble [Source:HGNC Symbol;Acc:122] |
Percent Identity: | 66.9 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | NICRSPIAEAVFRKLVTDQNVSENWVIDSGAVSDWNVGRS-PDPRAVSCLRNHGIHTAHKAR-QITKEDF |
NIC.S.IAEAVFRKLVTD.N.SENW..DS.A.S....G...PD....SC...H.I...H.A..QITK.DF | |
Retrocopy | NICWSLIAEAVFRKLVTD*NISENWRVDSAATSRYETGNP<PDY*EQSCMNRHSIPMRHVAG<QITKKDF |
Parental | ATFDYILCMDESNLRDLNRKSNQVKNCRAKIELLGSYDPQKQLIIEDPYYGNDSDFETVYQQCVRCCRAF |
.T.DYILC.DESN..D.NRKSNQVKNC.AKIELL.SY.PQKQL.I.DP.Y.NDSDFET.YQQ.VRC.R.. | |
Retrocopy | VTLDYILCVDESNQKDFNRKSNQVKNCKAKIELLESYYPQKQLLIKDPSYRNDSDFETIYQQYVRCYRSC |
Parental | LEKAH |
LEKAH | |
Retrocopy | LEKAH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |