RetrogeneDB ID: | retro_meug_1717 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold54737:10786..11098(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23 | ||
Ensembl ID: | ENSMEUG00000001188 | ||
Aliases: | None | ||
Description: | ribosomal protein L23 [Source:HGNC Symbol;Acc:10316] |
Percent Identity: | 80.77 % |
Parental protein coverage: | 74.29 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIV |
.YIISVKGIKGRLNRLPA.GVGDMVM.TVKKG.PELRKKVHP..VI.Q.K.Y.RKDG..LYFED.AGVIV | |
Retrocopy | VYIISVKGIKGRLNRLPAVGVGDMVMVTVKKGEPELRKKVHPPMVIWQQKPY*RKDGMLLYFEDHAGVIV |
Parental | NNKGEMKGSAITGPVAKECADLWPRIASNAGSIA |
NNKGE.KGSAI.GPVAK.CADLW....SNAGSIA | |
Retrocopy | NNKGEVKGSAIMGPVAKKCADLWSKVVSNAGSIA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |