RetrogeneDB ID: | retro_chof_872 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_159364:578..818(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23 | ||
Ensembl ID: | ENSCHOG00000009153 | ||
Aliases: | None | ||
Description: | ribosomal protein L23 [Source:HGNC Symbol;Acc:10316] |
Percent Identity: | 77.78 % |
Parental protein coverage: | 57.86 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLW |
MVM.TVKK..PELRK..HPAV...Q.KSY.R.DG.FLYFEDNAG.I.NNKGEMKGSAITGPVAKECA.LW | |
Retrocopy | MVMVTVKKDRPELRKMAHPAVQ**Q-KSYWRTDGMFLYFEDNAGIIANNKGEMKGSAITGPVAKECAALW |
Parental | PRIASNAGSIA |
..IASNAGS.A | |
Retrocopy | TSIASNAGSTA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |