RetrogeneDB ID: | retro_meug_515 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold127715:2147..2558(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMEUG00000014247 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL23 | ||
Ensembl ID: | ENSMEUG00000001188 | ||
Aliases: | None | ||
Description: | ribosomal protein L23 [Source:HGNC Symbol;Acc:10316] |
Percent Identity: | 85. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKP |
MSKRGRGGSS.AKF.ISLGLPVGAVI.CADNTGA.NLYIIS....KGRLN.LPAAG.G.MVMATVKKGKP | |
Retrocopy | MSKRGRGGSSVAKF*ISLGLPVGAVISCADNTGAENLYIISM---KGRLNTLPAAGIGNMVMATVKKGKP |
Parental | ELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSIA |
EL.KKVH.AVVI.Q.K...RKDGVFLYFEDN.GVIVNNKG.MKGSAITGPVAKECADLWPR.ASNAGSIA | |
Retrocopy | ELQKKVHAAVVIQQWKPFQRKDGVFLYFEDNTGVIVNNKGKMKGSAITGPVAKECADLWPRTASNAGSIA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |