RetrogeneDB ID: | retro_nleu_427 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397264.1:50554336..50555626(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT18 | ||
Ensembl ID: | ENSNLEG00000017732 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.51 % |
Parental protein coverage: | 99.07 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | TRSTFSTNYRSLGSVQAPSYGARPVSSAASVYA----GAGGSGSRISVSRSTSFRGGMGSGGLAAGIAGG |
TRSTFST..RSLGSV..PSY.A.PVSSAAS.Y.....GAGGSGSRISVSRS.SFRGGMGSGG.AAG.AGG | |
Retrocopy | TRSTFSTSCRSLGSV*VPSYSAWPVSSAASIYGGTLCGAGGSGSRISVSRSISFRGGMGSGGPAAGMAGG |
Parental | LAGVGGIQNEKETMQSLNDRLASYLDRVRSLETENRRLESKIREHLEKKGPQVRDWSHYFKIIEDLRAQI |
L.GVG.IQNEKETMQSLN..LASYLDR.RSLETENR.LESKI.EHL.KKGP.VRDWSHYFK..EDLR.QI | |
Retrocopy | LEGVGSIQNEKETMQSLNNHLASYLDRLRSLETENRKLESKIWEHLQKKGPHVRDWSHYFKTVEDLRVQI |
Parental | FANTVDNARIVLQIDNARLAADDFRVKYETELAMRQSVENDIHGLRKVIDDTNVTRLQLETEIEALKEEL |
F.NTV.NA.I.LQIDNARLAADDFRVKYETELAM.QSVE.DIH.L.KV.D.TNVTRLQLETEIEALKEEL | |
Retrocopy | FTNTVNNAHIILQIDNARLAADDFRVKYETELAMHQSVESDIHKLHKVTDVTNVTRLQLETEIEALKEEL |
Parental | LFMKKNHEEEVKGLQAQIASSGLTVEVDAPKSQDLAKIMADIRAQYDELARKNREELDKYWSQQIEESTT |
LFMKK.HEEEVKGLQAQIASSGLTVEVDAPKSQDL.KIMADI.AQYDELA.KN.EELDKYWSQQIEESTT | |
Retrocopy | LFMKKKHEEEVKGLQAQIASSGLTVEVDAPKSQDLPKIMADIPAQYDELAQKNLEELDKYWSQQIEESTT |
Parental | VVTTQSAEVGAAETTLTELRRTVQSLEIDLDSMRNLKASLENSLREVEARYALQMEQLNGILLHLESELA |
VVTT.S.EVGAAE..LTELRRTVQSLE.DLDSMRNLKASLENSL.EVEA.YALQMEQLNGILLHLESELA | |
Retrocopy | VVTT*STEVGAAEMILTELRRTVQSLETDLDSMRNLKASLENSLKEVEAHYALQMEQLNGILLHLESELA |
Parental | QTRAEGQRQAQEYEALLNIKVKLEAEIATYRRLLEDGEDFNLGDALDSSNSMQTIQKTTTRRIVDGKVVS |
QT.AEGQRQAQEYEALLNIKV.LE.EIATY.RLLEDGEDFNLGDALD.SNS.QTIQKTTT...VDGKVVS | |
Retrocopy | QTQAEGQRQAQEYEALLNIKVRLEVEIATYHRLLEDGEDFNLGDALDISNSTQTIQKTTTCQTVDGKVVS |
Parental | ETNDTKVLRH |
ETNDTKVLRH | |
Retrocopy | ETNDTKVLRH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |