RetrogeneDB ID: | retro_meug_1392 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold38817:9248..9639(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT18 | ||
Ensembl ID: | ENSMEUG00000012262 | ||
Aliases: | None | ||
Description: | keratin 18 [Source:HGNC Symbol;Acc:6430] |
Percent Identity: | 69.92 % |
Parental protein coverage: | 51.98 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | DALAQKNREELDKYWSQQIEESTVTINTRSEEVEAARNTVTELKRTVQSLEIDLDSLRNLKTSLEDSLRE |
DALA.KNREE.DKYWSQQIEESTV.INTRSE.VE.ARN.VTELK.TVQSLE.D.DSL.N.KT..ED.LR. | |
Retrocopy | DALALKNREEFDKYWSQQIEESTVVINTRSEKVEEARNSVTELKQTVQSLETDPDSL*NPKTNMEDILRR |
Parental | VET-RYAIQMEQINTALLHLEAELGQT-RTEGQRHAQEYQALLNIKDKLEAEINTYRNLLENG |
VET.R.A.Q.EQINT.LLHLEA.LGQT....G.........L.NIK..LEAEINT..NL.ENG | |
Retrocopy | VET<RCAFQTEQINTTLLHLEAKLGQT<KQKGRARHRNAEVLHNIKVILEAEINTCGNLQENG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |