Parental gene:

KRT18, ENSPPYG00000004563

Aliases:None
Description:keratin 18 [Source:HGNC Symbol;Acc:6430]
Organism:Orangutan (Pongo abelii)
Coordinates:12:52713365..52717101(+)


>ENSPPYG00000004563
ATGAACTTCACCACTCGCTCCACCTTCTCCACCAACTACCGGTCCCTGGGCTCTGTCCAGGCGCCCAGCTACGGCGCCCG
GCCGGTCAGCAGCGCTGCCAGCGTCTATGCAGGCGCTGGGGGCTCTGGTTCCCGGATCTCCGTGTCCCGCTCCACCAGCT
TCAGGGGCGGCATGGGGTCCGGGGGCCTGGCCACGGGGATAGCCGGGGGTCTGGCAGGAATGGGAGGCATCCAGAACGAG
AAGGAGACCATGCAAAGCCTGAACGACCGCCTGGCCTCTTATCTGGACAGAGTGAGGAGCCTGGAGACCGAGAACCGGAG
GCTGGAGAGCAAAATCCGGGAGCACTTGGAGAAGAAGGGACCCCAGGTCAGAGACTGGAGCCATTACTTCAAGATCATCG
AGGACCTGAGGGCTCAGATCTTCGCAAATACTGTGGACAATGCCCGCATCGTTCTGCAGATTGACAATGCCCGTCTTGCT
GCTGATGACTTTAGAGTCAAGTATGAGACAGAGCTGGCCATGCGCCAGTCTGTGGAGAACGACATCCACGGGCTCCGCAA
GGTCATTGATGACACCAATGTCACTCGACTGCAGCTGGAGACAGAGATCGAGGCTCTCAAGGAGGAGCTGCTCTTTATGA
AGAAGAACCACGAAGAGGAAGTAAAAGGCCTTCAAGCCCAGATTGCCAGCTCTGGGTTGACCGTGGAGGTAGATGCCCCC
AAATCTCAGGACCTCGCCAAGATCATGGCAGACATCCGGGCCCAATATGACGAGCTGGCTCGGAAGAACCGAGAGGAGCT
AGACAAGTACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGTCACCACACAGTCTGCCGAGGTTGGAGCTGCTGAGA
CGACGCTCACAGAGCTGAGACGTACAGTCCAGTCCTTGGAGATCGACCTGGACTCCATGAGAAATCTGAAGGCCAGCTTG
GAGAACAGCCTGAGGGAGGTGGAGGCCCGCTACGCCCTACAGATGGAGCAGCTCAACGGGATCCTGCTGCACCTTGAGTC
AGAGCTGGCACAGACCCGGGCAGAGGGACAGCGCCAGGCCCAGGAGTATGAGGCCCTGCTGAACATCAAGGTCAAGCTGG
AGGCTGAGATCGCCACCTACCGCCGCCTGCTGGAAGATGGCGAAGACTTTAATCTTGGTGATGCCTTGGACAGCAGCAAC
TCCATGCAAACCATCCAAAAGACCACCACCCGCCGGATAGTGGATGGCAAAGTGGTGTCTGAGACCAATGACACCAAAGT
TCTGAGGCATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .05 RPM
SRP007412_cerebellum 6 .20 RPM
SRP007412_heart 1 .29 RPM
SRP007412_kidney 50 .15 RPM
SRP007412_liver 198 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011981 possible_ortholog 2 retrogenes
retro_amel_1366, retro_amel_1896,
Canis familiaris ENSCAFG00000007154 possible_ortholog 10 retrogenes
retro_cfam_1045, retro_cfam_1205, retro_cfam_1393, retro_cfam_1413, retro_cfam_1672, retro_cfam_2124, retro_cfam_2170, retro_cfam_611, retro_cfam_698, retro_cfam_883,
Callithrix jacchus ENSCJAG00000018165 ortholog_many2many 29 retrogenes
retro_cjac_1323, retro_cjac_1457, retro_cjac_1638, retro_cjac_1847, retro_cjac_1857, retro_cjac_1885, retro_cjac_1915, retro_cjac_2074, retro_cjac_2087, retro_cjac_2179, retro_cjac_2232, retro_cjac_2252, retro_cjac_2349, retro_cjac_2614, retro_cjac_2689, retro_cjac_2842, retro_cjac_3036, retro_cjac_3145, retro_cjac_3995, retro_cjac_4001, retro_cjac_4065, retro_cjac_4120, retro_cjac_4138, retro_cjac_4158, retro_cjac_4200, retro_cjac_626, retro_cjac_794, retro_cjac_878, retro_cjac_955,
Cavia porcellus ENSCPOG00000002618 possible_ortholog 1 retrogene
retro_cpor_111,
Echinops telfairi ENSETEG00000008130 possible_ortholog 1 retrogene
retro_etel_1177,
Homo sapiens ENSG00000111057 ortholog_one2one 60 retrogenes
retro_hsap_1129, retro_hsap_1153, retro_hsap_1226, retro_hsap_1404, retro_hsap_1650, retro_hsap_1774, retro_hsap_1818, retro_hsap_1907, retro_hsap_1981, retro_hsap_2115, retro_hsap_2174, retro_hsap_2242, retro_hsap_2276, retro_hsap_2353, retro_hsap_2361, retro_hsap_2433, retro_hsap_2461, retro_hsap_2517, retro_hsap_2543, retro_hsap_2565, retro_hsap_2571, retro_hsap_2626, retro_hsap_2752, retro_hsap_2848, retro_hsap_2869, retro_hsap_2877, retro_hsap_2915, retro_hsap_2922, retro_hsap_2973, retro_hsap_306, retro_hsap_3098, retro_hsap_3161, retro_hsap_3203, retro_hsap_3227, retro_hsap_3236, retro_hsap_327, retro_hsap_3400, retro_hsap_3452, retro_hsap_3492, retro_hsap_3498, retro_hsap_3567, retro_hsap_3645, retro_hsap_3651, retro_hsap_3948, retro_hsap_4145, retro_hsap_4201, retro_hsap_4215, retro_hsap_4238, retro_hsap_4277, retro_hsap_434, retro_hsap_4681, retro_hsap_4727, retro_hsap_4736, retro_hsap_4756, retro_hsap_483, retro_hsap_4915, retro_hsap_4919, retro_hsap_832, retro_hsap_846, retro_hsap_866,
Gorilla gorilla ENSGGOG00000010157 ortholog_one2one 28 retrogenes
retro_ggor_1246, retro_ggor_1513, retro_ggor_1606, retro_ggor_1641, retro_ggor_1692, retro_ggor_1725, retro_ggor_1838, retro_ggor_1914, retro_ggor_2024, retro_ggor_2062, retro_ggor_2128, retro_ggor_2201, retro_ggor_2301, retro_ggor_2360, retro_ggor_2407, retro_ggor_2462, retro_ggor_2468, retro_ggor_2653, retro_ggor_2815, retro_ggor_2823, retro_ggor_2903, retro_ggor_2941, retro_ggor_3069, retro_ggor_455, retro_ggor_685, retro_ggor_692, retro_ggor_881, retro_ggor_898,
Macropus eugenii ENSMEUG00000012262 ortholog_one2many 14 retrogenes
retro_meug_1392, retro_meug_1430, retro_meug_1461, retro_meug_1467, retro_meug_1631, retro_meug_1651, retro_meug_1810, retro_meug_2024, retro_meug_2082, retro_meug_2132, retro_meug_323, retro_meug_425, retro_meug_575, retro_meug_771,
Myotis lucifugus ENSMLUG00000022439 possible_ortholog 8 retrogenes
retro_mluc_1247, retro_mluc_1248, retro_mluc_1758, retro_mluc_1876, retro_mluc_2179, retro_mluc_2234, retro_mluc_2420, retro_mluc_549,
Macaca mulatta ENSMMUG00000031911 ortholog_one2many 4 retrogenes
retro_mmul_1601, retro_mmul_279, retro_mmul_91, retro_mmul_948,
Mustela putorius furo ENSMPUG00000006369 possible_ortholog 2 retrogenes
retro_mputfur_1591, retro_mputfur_171,
Mus musculus ENSMUSG00000023043 possible_ortholog 2 retrogenes
retro_mmus_1152, retro_mmus_479,
Nomascus leucogenys ENSNLEG00000017732 ortholog_one2one 45 retrogenes
retro_nleu_1234, retro_nleu_1238, retro_nleu_1252, retro_nleu_1346, retro_nleu_1397, retro_nleu_1421, retro_nleu_1454, retro_nleu_1500, retro_nleu_1547, retro_nleu_1563, retro_nleu_1683, retro_nleu_1801, retro_nleu_1872, retro_nleu_1953, retro_nleu_1960, retro_nleu_2023, retro_nleu_2173, retro_nleu_2293, retro_nleu_2308, retro_nleu_2310, retro_nleu_241, retro_nleu_2494, retro_nleu_2551, retro_nleu_264, retro_nleu_2721, retro_nleu_2807, retro_nleu_2901, retro_nleu_2935, retro_nleu_3008, retro_nleu_3061, retro_nleu_353, retro_nleu_357, retro_nleu_364, retro_nleu_415, retro_nleu_427, retro_nleu_505, retro_nleu_512, retro_nleu_613, retro_nleu_639, retro_nleu_699, retro_nleu_785, retro_nleu_791, retro_nleu_824, retro_nleu_832, retro_nleu_924,
Oryctolagus cuniculus ENSOCUG00000027691 possible_ortholog 1 retrogene
retro_ocun_58,
Pan troglodytes ENSPTRG00000004996 ortholog_one2one 58 retrogenes
retro_ptro_1121, retro_ptro_1172, retro_ptro_1188, retro_ptro_1251, retro_ptro_1321, retro_ptro_1405, retro_ptro_1420, retro_ptro_1462, retro_ptro_1482, retro_ptro_1496, retro_ptro_1501, retro_ptro_1586, retro_ptro_1610, retro_ptro_1659, retro_ptro_1721, retro_ptro_1725, retro_ptro_1737, retro_ptro_1772, retro_ptro_1860, retro_ptro_193, retro_ptro_1941, retro_ptro_1946, retro_ptro_1971, retro_ptro_1977, retro_ptro_2010, retro_ptro_2094, retro_ptro_2188, retro_ptro_2244, retro_ptro_2277, retro_ptro_2310, retro_ptro_2341, retro_ptro_2366, retro_ptro_2371, retro_ptro_247, retro_ptro_2470, retro_ptro_2476, retro_ptro_264, retro_ptro_2679, retro_ptro_2817, retro_ptro_2852, retro_ptro_2861, retro_ptro_2881, retro_ptro_2900, retro_ptro_2956, retro_ptro_3079, retro_ptro_3110, retro_ptro_3144, retro_ptro_3150, retro_ptro_3169, retro_ptro_3277, retro_ptro_364, retro_ptro_581, retro_ptro_587, retro_ptro_600, retro_ptro_677, retro_ptro_787, retro_ptro_841, retro_ptro_962,
Pteropus vampyrus ENSPVAG00000009361 possible_ortholog 2 retrogenes
retro_pvam_140, retro_pvam_557,
Rattus norvegicus ENSRNOG00000047393 possible_ortholog 3 retrogenes
retro_rnor_1513, retro_rnor_2529, retro_rnor_581,
Ictidomys tridecemlineatus ENSSTOG00000015587 possible_ortholog 3 retrogenes
retro_itri_1288, retro_itri_1517, retro_itri_1609,
Tursiops truncatus ENSTTRG00000012977 possible_ortholog 2 retrogenes
retro_ttru_1273, retro_ttru_463,
Vicugna pacos ENSVPAG00000007421 possible_ortholog 3 retrogenes
retro_vpac_287, retro_vpac_390, retro_vpac_53,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_250 85.15 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_pabe_290 83.56 69.07
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_pabe_362 84.03 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_pabe_374 74.63 78.37
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_pabe_934 81.13 97.67
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_pabe_956 85.02 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_pabe_1020 82.10 75.12
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_pabe_1130 81.34 62.09
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_pabe_1161 76.87 67.91
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_pabe_1399 84.22 100.00
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_pabe_1486 79.95 99.53
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_pabe_1487 82.21 64.19
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_pabe_1522 81.47 78.60
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_pabe_1552 90.99 54.19
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_pabe_1628 85.35 63.49
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_pabe_1751 84.72 100.00
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_pabe_1809 79.58 66.05
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_pabe_1852 80.50 92.56
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_pabe_1870 75.63 100.00
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_pabe_1890 80.32 100.00
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_pabe_1893 85.49 59.07
Please wait, loading
Please wait, loading
Please wait, loading
22. retro_pabe_1942 81.68 77.44
Please wait, loading
Please wait, loading
Please wait, loading
23. retro_pabe_1966 85.98 100.00
Please wait, loading
Please wait, loading
Please wait, loading
24. retro_pabe_1991 83.06 69.53
Please wait, loading
Please wait, loading
Please wait, loading
25. retro_pabe_2060 74.28 88.14
Please wait, loading
Please wait, loading
Please wait, loading
26. retro_pabe_2128 83.87 100.00
Please wait, loading
Please wait, loading
Please wait, loading
27. retro_pabe_2134 77.05 56.51
Please wait, loading
Please wait, loading
Please wait, loading
28. retro_pabe_2145 81.57 50.23
Please wait, loading
Please wait, loading
Please wait, loading
29. retro_pabe_2174 84.56 100.00
Please wait, loading
Please wait, loading
Please wait, loading
30. retro_pabe_2278 88.27 83.02
Please wait, loading
Please wait, loading
Please wait, loading
31. retro_pabe_2335 78.03 70.70
Please wait, loading
Please wait, loading
Please wait, loading
32. retro_pabe_2359 76.28 86.05
Please wait, loading
Please wait, loading
Please wait, loading
33. retro_pabe_2376 86.03 53.26
Please wait, loading
Please wait, loading
Please wait, loading
34. retro_pabe_2381 78.25 71.63
Please wait, loading
Please wait, loading
Please wait, loading
35. retro_pabe_2427 80.67 69.30
Please wait, loading
Please wait, loading
Please wait, loading
36. retro_pabe_2431 85.31 99.77
Please wait, loading
Please wait, loading
Please wait, loading
37. retro_pabe_2465 80.74 100.00
Please wait, loading
Please wait, loading
Please wait, loading
38. retro_pabe_2564 79.28 57.67
Please wait, loading
Please wait, loading
Please wait, loading
39. retro_pabe_2628 82.81 74.19
Please wait, loading
Please wait, loading
Please wait, loading
40. retro_pabe_2655 74.80 56.98
Please wait, loading
Please wait, loading
Please wait, loading
41. retro_pabe_2675 84.37 78.60
Please wait, loading
Please wait, loading
Please wait, loading
42. retro_pabe_2682 84.19 67.67
Please wait, loading
Please wait, loading
Please wait, loading
43. retro_pabe_2797 84.52 74.88
Please wait, loading
Please wait, loading
Please wait, loading
44. retro_pabe_2822 83.90 74.88
Please wait, loading
Please wait, loading
Please wait, loading
45. retro_pabe_2855 77.12 54.19
Please wait, loading
Please wait, loading
Please wait, loading
46. retro_pabe_2884 76.67 100.00
Please wait, loading
Please wait, loading
Please wait, loading
47. retro_pabe_2890 68.58 75.81
Please wait, loading
Please wait, loading
Please wait, loading
48. retro_pabe_2992 85.15 100.00
Please wait, loading
Please wait, loading
Please wait, loading
49. retro_pabe_2998 82.83 100.00
Please wait, loading
Please wait, loading
Please wait, loading
50. retro_pabe_3252 71.28 68.60
Please wait, loading
Please wait, loading
Please wait, loading
51. retro_pabe_3400 81.25 100.00
Please wait, loading
Please wait, loading
Please wait, loading
52. retro_pabe_3401 80.63 72.33
Please wait, loading
Please wait, loading
Please wait, loading
53. retro_pabe_3437 79.91 51.63
Please wait, loading
Please wait, loading
Please wait, loading
54. retro_pabe_3448 80.77 53.95
Please wait, loading
Please wait, loading
Please wait, loading
55. retro_pabe_3464 76.56 88.14
Please wait, loading
Please wait, loading
Please wait, loading
56. retro_pabe_3488 83.53 100.00
Please wait, loading
Please wait, loading
Please wait, loading
57. retro_pabe_3636 87.80 78.14
Please wait, loading
Please wait, loading
Please wait, loading
58. retro_pabe_3681 82.69 65.58
Please wait, loading
Please wait, loading
Please wait, loading
59. retro_pabe_3702 76.02 79.07
Please wait, loading
Please wait, loading
Please wait, loading
60. retro_pabe_3824 84.67 66.28
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000004563 retrocopies