RetrogeneDB ID: | retro_meug_1461 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold413765:4..385(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT18 | ||
Ensembl ID: | ENSMEUG00000012262 | ||
Aliases: | None | ||
Description: | keratin 18 [Source:HGNC Symbol;Acc:6430] |
Percent Identity: | 72.87 % |
Parental protein coverage: | 50.4 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | NHEEEVNSLQAQIAGCGLTVEVDSPKSQDLSKVMADIRAQYDALAQKNREELDKYWSQQIEESTVTINTR |
N.EEEV.SLQAQI.G...T.EVDSPKSQDLSKVM.DI.AQY..L.QKN.EELDKY..QQI.EST.TIN.. | |
Retrocopy | NYEEEVKSLQAQITGSRMTMEVDSPKSQDLSKVMVDIQAQYNTLTQKNIEELDKYLLQQI*ESTITINMG |
Parental | SEEVEAARNTVTELKRTVQSLEIDLDSLRNLKTSLEDSLREVETRYAI--QMEQINTAL |
SEEVEA...T..E..R..QSLEIDLDSL.NLKTSLEDS.REVETR..I...MEQINTAL | |
Retrocopy | SEEVEAGGKTAPE--RIFQSLEIDLDSLQNLKTSLEDSRREVETRFTI*MEMEQINTAL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |