RetrogeneDB ID: | retro_mluc_1758 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429903:3178253..3179097(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000022439 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.99 % |
Parental protein coverage: | 64.64 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 7 |
Parental | FSTRSSFSSNYRTLGSVQAPSYRVRPTSSAASVYAGAG-GSGSRISVSHSTSVRSGWGAG-GLAAGMAGG |
FST.S.FS.NY..LGS...P.....P.SS..SVY..AG.G.GS.IS.S.ST.V...W....GLA.GMAGG | |
Retrocopy | FSTCSIFSTNYQNLGSM--PGDQAQPASSTDSVY--AG<GLGSQISTSQSTRVQGSWRSW<GLAVGMAGG |
Parental | -LAGIGGIQSEKETMQGLNDRLASYLERVRSLEADNRRLEIKIREHLEKKGPQ-VRDWG-HYFKTIEDLR |
.LAGIGGIQSEKE.MQ.LND.LASYLERVRSLEADN..L..K.REH.EK.GP..VRDWG.HYFKTIE.LR | |
Retrocopy | >LAGIGGIQSEKEIMQCLNDGLASYLERVRSLEADNQKLKSKFREHVEKEGPR<VRDWG<HYFKTIEELR |
Parental | AQIFASSVDNARIVLQIDNARLAADDFRVKYETELAMRQSVESDINGLRKVIDDTNITRLQLETEIEALK |
A..FASS.D.A.I.LQ.DNA..AADDFRVKYET.LAM.QSVESDIN.L.KV.DDTN.T.L.LET.IEA.. | |
Retrocopy | AKVFASSGDSACIILQFDNAQIAADDFRVKYET*LAMCQSVESDINRL*KVTDDTNVTQLPLETGIEAIL |
Parental | EELIFMKKNHEEGRKKYKEQV-CRRRVRVKLDA-PKSQDLSKIMADIRAQYDELARKNREELDKYWSQQI |
EEL.FM.K.HEE.......Q..C...V...L.A.PKSQDLSKIM..I..QYD.LA.KN.E.LDKYWSQQ. | |
Retrocopy | EELLFM*KDHEEEVNGLPNQT<CQLWVTMELNA<PKSQDLSKIMVHIQVQYDKLAWKN*EKLDKYWSQQT |
Parental | EESTTVVTSQSAEV |
.ESTTVVTSQ.A.. | |
Retrocopy | GESTTVVTSQTANM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |