RetrogeneDB ID: | retro_meug_2132 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold93009:13367..13845(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT18 | ||
Ensembl ID: | ENSMEUG00000012262 | ||
Aliases: | None | ||
Description: | keratin 18 [Source:HGNC Symbol;Acc:6430] |
Percent Identity: | 80.75 % |
Parental protein coverage: | 63.49 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 1 |
Parental | GLTVEVDSP-KSQDLSKVMADIRAQYDALAQKNREELDKYWSQQIEESTVTINTRSEEVEAARNTVTELK |
GLT.EVDS..K.QDLSKVMADI.AQYDALAQKNRE.LDKY.SQQI.ESTVTIN..SEEVEAA.NTVT.LK | |
Retrocopy | GLTMEVDSQ>K*QDLSKVMADI*AQYDALAQKNREKLDKY*SQQIVESTVTINITSEEVEAA*NTVTKLK |
Parental | RTVQSLEIDLDSLRNLKTSLEDSLREVETRYAIQMEQINTALLHLEAELGQTRTEGQRHAQEYQALLNIK |
.TVQSLE.DLD..RNL..SL..SLREVETRYAI.MEQINT.LLH.E.ELGQT.TEGQ..AQEY.AL.NIK | |
Retrocopy | HTVQSLETDLDYFRNLQISLNYSLREVETRYAIHMEQINTGLLHVEVELGQTWTEGQSQAQEY*ALFNIK |
Parental | DKLEAEINTYRNLLENGGEDF |
DKLEAEINTY.NLLEN.GEDF | |
Retrocopy | DKLEAEINTYQNLLEN-GEDF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |