RetrogeneDB ID: | retro_meug_2024 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold8109:10446..10980(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | KRT18 | ||
Ensembl ID: | ENSMEUG00000012262 | ||
Aliases: | None | ||
Description: | keratin 18 [Source:HGNC Symbol;Acc:6430] |
Percent Identity: | 81.01 % |
Parental protein coverage: | 71.03 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MRKNHEEEVNSLQAQIAGCGLTVEVDSPKSQDLSKVMADIRAQYDALAQKNREELDKYWSQQIEESTVTI |
MRK.HEEEV.SLQ.QI.G.GLT.EVDSPKSQDL..V.ADI.A..D.LA.KNRE.LDKYWSQQIEEST.TI | |
Retrocopy | MRKSHEEEVKSLQGQITGSGLTMEVDSPKSQDLNEVIADIQAHSDPLARKNREKLDKYWSQQIEESTMTI |
Parental | NTRSEEVEAARNTVTELKRTVQSLEIDLDSLRNLKTSLEDSLREVETRYAIQMEQINTALLHLEAELGQT |
NTRSEEVEAARNTVTELKRTVQSL.IDLD.LRNLKT.LED.LREV.T.YAI.MEQINT.LLHLEAEL.QT | |
Retrocopy | NTRSEEVEAARNTVTELKRTVQSLKIDLDPLRNLKTNLEDILREVAT*YAIHMEQINTPLLHLEAELEQT |
Parental | RTEGQRHAQEYQALLNIKDKLEAEINTYRNLLENGGEDF |
.TEGQ..AQEY..LLNI.DKLEAEINTY.NLLE..GEDF | |
Retrocopy | GTEGQCQAQEYKTLLNIQDKLEAEINTYGNLLES-GEDF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |