RetrogeneDB ID: | retro_mluc_549 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429767:44246510..44247208(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000022439 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.78 % |
Parental protein coverage: | 52.7 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | AGGLAAGMAGGLAGIG-GIQSEKETMQGLNDRLASYLERVRSLEADNRRLEIKIREHLEKKGPQVRDWGH |
.GGLAAGMA...AGIG.GI.SEK...Q.L.D.LASYL..VRSLEADNRR.E.KI.EHL.KKGPQVRD.GH | |
Retrocopy | SGGLAAGMAQCVAGIG<GIHSEK-AIQCLHDYLASYLVKVRSLEADNRRPESKIWEHLKKKGPQVRDRGH |
Parental | YFKTIEDLRAQIFASSVDNARIVLQID-NARLAADDFRVKYETELAMRQSVESDINGLRKVIDDTNITRL |
YFKT...LR.QIFA.SVDNA.IVLQID..A.LAADDFRVKYET.LAM.QSVESDI.GLRKVIDD...T.L | |
Retrocopy | YFKTTQVLRTQIFANSVDNACIVLQID>SAHLAADDFRVKYET*LAMSQSVESDIIGLRKVIDDIHLTHL |
Parental | QLETEIEALKEELIFMKKNHEEGRKKYKEQVCRRRVRVKLDA-PKSQDLSKIMADIRAQYDELARKNREE |
QLE.EI.ALKEEL...KKN..E.......Q.......VKLDA.P.S.DLSKIMA.I..QYDELA..N.E. | |
Retrocopy | QLEREIKALKEELLLKKKNPKEEVNDQQNQIATSELTVKLDA<PQSWDLSKIMAVIQSQYDELAQNNQEK |
Parental | LDKYWSQQIEESTTVVTSQSAEVRDAE |
LDK.WSQQ.EESTTVVT.Q..E...AE | |
Retrocopy | LDKNWSQQTEESTTVVTLQTTEIEAAE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |