Parental gene:

ENSAMEG00000011981

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193014.1:478718..482499(+)


>ENSAMEG00000011981
CCGAGCCTGAGTCCCGGCCTCTCGACTTACTCTCCGAACAGCATGAGCTTCACCACCCACTCCACCTTCTCTTCCAACTA
TCGGTCCCTGGGCTCCGGGCAGTCGCCCAGCCACCGGATCAGGCCGGTCAGCAGCGCGGCCAGCGTCTATGCAGGCGCCG
GAGGCTCAGGCTCCCGGATCTCCGTATCCCGCTCCACCAGCCTCCGGGGCGGCTGGGGGTCCGGGGGCCTGGCCGCGGGG
ATGGCCGGGGGCTCCGGGGGTCTGGCCGGCATAGGGGGCATCCAGGGCGAGAAGGAGACCATGCAAGACCTGAACGACCG
CCTGGCCTCCTACCTGGAGAGGGTGAGGAGCCTGGAGGCCGATAATCAGAGACTGGAGATGAGAATCCGGGAACACCTGG
AGAAGAAGGGACCCCAGGTCAAAGACTGGGGGCATTACTTCAAGACCATCGAGGAGCTGAGGGCTCAGATCTTTGCGAGC
TCTGTGGACAATGCCCGCATCGTTCTGCAGATTGACAATGCCCGCCTTGCTGCTGAAGACTTCAGAGTCAAGTATGAGAC
GGAGCTGGCCATGCGCCAGTCTGTGGAGAATGACATCCATGGGCTCCGCAAGGTCATTGATGACACCAATGTCACTCGGC
TACAGCTGGAGACCGAGATTGAGGCTCTCAAGGAGGAGCTGCTCTTCATGAAGAAGAACCATGAGGAGGAAGTAAAGGGT
CTACAAAACCAAATTGCCAACTCTGGGTTGACTGTGGAGTTGGACGCCCCCAAATCTCAGGACCTCAGCAAGATCATGGC
AGACATCCGGGCCCAGTATGACGAGCTGGCTCAGAAGAACCGAGAGGAGCTGGACAAGTACTGGTCCCAGCAGATTGAGG
AGAGCACCACAGTGGTCACCACACAGACCGCGGAGATAGGAGAGGCTGAGATGACCCTCACGGAGCTGAGACGTACCGCC
CAGTCCTTGGAGATCAACCTGGACTCGATGAGAAACCTGAAAGCCAGCTTGGAGAACAGCCTGAGGGAAGTCGAGACCCG
CTACGTGATGCAGATGGAGCAGCTCAACGGGGTCCTGCTGCACCTGGAGTCAGAGCTGTCCCAGACCCGGGCTGAGGGGC
AGCGCCAGGCCCAGGAGTACGAGGCCCTGCTGAATGTCAAGGTCAAGCTGGAGGCTGAGATCGCCACCTACCGTCGCCTG
CTGGAAGACGGGGAGGACTTCAGTCTTACTGACGCCCTGGACAGCAGCAGCTCCATTCAGACCATCCAGAAGACCACCAC
GCGCAGGATTGTGGACGGCAAGGTGGTGTCTGAGACCAACGACACCAAAGTTCTGAGGCGTTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007154 ortholog_one2many 10 retrogenes
Callithrix jacchus ENSCJAG00000018165 possible_ortholog 29 retrogenes
Cavia porcellus ENSCPOG00000002618 ortholog_one2many 1 retrogene
Echinops telfairi ENSETEG00000008130 possible_ortholog 1 retrogene
Homo sapiens ENSG00000111057 possible_ortholog 60 retrogenes
Gorilla gorilla ENSGGOG00000010157 possible_ortholog 28 retrogenes
Macropus eugenii ENSMEUG00000012262 ortholog_one2many 14 retrogenes
Myotis lucifugus ENSMLUG00000022439 ortholog_one2many 8 retrogenes
Macaca mulatta ENSMMUG00000031911 possible_ortholog 4 retrogenes
Mustela putorius furo ENSMPUG00000006369 ortholog_one2many 2 retrogenes
Mus musculus ENSMUSG00000023043 ortholog_one2one 2 retrogenes
Nomascus leucogenys ENSNLEG00000017732 possible_ortholog 45 retrogenes
Oryctolagus cuniculus ENSOCUG00000027691 ortholog_one2many 1 retrogene
Pongo abelii ENSPPYG00000004563 possible_ortholog 60 retrogenes
Pan troglodytes ENSPTRG00000004996 possible_ortholog 58 retrogenes
Pteropus vampyrus ENSPVAG00000009361 ortholog_one2one 2 retrogenes
Rattus norvegicus ENSRNOG00000047393 ortholog_one2many 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000015587 ortholog_one2one 3 retrogenes
Tursiops truncatus ENSTTRG00000012977 ortholog_one2one 2 retrogenes
Vicugna pacos ENSVPAG00000007421 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_1366 74.65 61.97
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2. retro_amel_1896 64.34 54.14
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Download FASTA sequences of all ENSAMEG00000011981 retrocopies