RetrogeneDB ID: | retro_chof_1839 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_39966:544..813(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSCHOG00000004000 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 67.39 % |
Parental protein coverage: | 98.91 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHC-GSCMKTVAGGAW |
MAK.TKK.GI..KY.T.YGAS.RK.VKKI.ISQH.KYTCS..GKTKMK..A...WHC..SC.KTVAGGAW | |
Retrocopy | MAKCTKKDGIISKYRTHYGASFRKIVKKIGISQHVKYTCS-*GKTKMKK*AMWTWHC<CSCRKTVAGGAW |
Parental | TYNTTSAVTVKSAIRRLKELKD |
T.N.TSAVTVK...R..K...D | |
Retrocopy | T*NATSAVTVKGD*RK*KTSRD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |