RetrogeneDB ID: | retro_tbel_1683 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_546:95940..96205(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 82.02 % |
Parental protein coverage: | 95.65 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | TKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYN-T |
TKKV.IVGKYG.RYGASLR.MVKKIEISQ.AKYTCSFCGKTKMKR.AVG.WHCGS.M.TV.G.A.TYN.T | |
Retrocopy | TKKVSIVGKYGPRYGASLRIMVKKIEISQCAKYTCSFCGKTKMKRQAVGSWHCGSYMRTVPGSA*TYN>T |
Parental | TSAVTVKSAIRRLKELKDQ |
TSA..VKSAI.RLK.LKDQ | |
Retrocopy | TSALSVKSAIERLKALKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |