RetrogeneDB ID: | retro_shar_133 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL834438.1:1828184..1828459(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSSHAG00000013417 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 72.63 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKM-VKKIEISQHAKYTCSFCGKTKMKR-RAVGIWHCGSCMKTVAGGA |
MAK.TKKVGIVGKYGT.YGASL......KI.IS.HAKYT..FC.KTKMKR..A.GI.HCGSC.K..AGG. | |
Retrocopy | MAKCTKKVGIVGKYGTHYGASLXXX>MEKIDISLHAKYTSFFCSKTKMKR<MALGICHCGSCVKAIAGGS |
Parental | WTYNTTSAVTVK-SAIRRLKELKDQ |
WTYN.TSAVTVK..AIRRLKE.K.Q | |
Retrocopy | WTYNPTSAVTVK<TAIRRLKEFKGQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |