RetrogeneDB ID: | retro_tbel_566 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2438:80701..80976(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 79.57 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAV-GIWHCGSCMKTVAGGAW |
.AKRTKKVGIVGK..T.YG.SL.KMVKKIE.S.HAKYTCSF.GKTKMKRRAV.G.WHCGS.M.TV..GA. | |
Retrocopy | LAKRTKKVGIVGKHRTCYGISLWKMVKKIEVSHHAKYTCSFGGKTKMKRRAV<GVWHCGSRMNTVDVGAR |
Parental | TYNTTSAVTVKSAIRRLKELKDQ |
TY.TTSAVTV.SAIRRLKE.KDQ | |
Retrocopy | TYYTTSAVTV*SAIRRLKEFKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |