RetrogeneDB ID: | retro_tbel_4244 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_73131:2756..3028(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 75.27 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
MA..TKKV..VGK..T.Y.A.L.K.VKKIEISQHAKYTCSFCGK.K.KRRAVGIWHCGSCM..VA.GA.T | |
Retrocopy | MA*CTKKVNTVGK*RTCYCAPLQKVVKKIEISQHAKYTCSFCGKIK-KRRAVGIWHCGSCMEMVASGA*T |
Parental | Y-NTTSAVTVKSAIRRLKELKDQ |
Y..T..A..VKSAIRRLKELKDQ | |
Retrocopy | Y<HTILAIPVKSAIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |