RetrogeneDB ID: | retro_shar_466 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849590.1:104343..104619(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSSHAG00000013417 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 78.26 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
MAK.TKKV.I.G.YG..Y.ASLRKMVKK.EISQHAKYTC.FCGKTKMK..AVGIWH.GS.M.TV..G..T | |
Retrocopy | MAKCTKKVEIIGNYGAHYDASLRKMVKKNEISQHAKYTCFFCGKTKMKS*AVGIWHYGSYMNTVSSGS*T |
Parental | YNTTSAVTVKSAIRRLKELKDQ |
YNTTSAVT.K.AIRRLKELKDQ | |
Retrocopy | YNTTSAVTIKFAIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |