RetrogeneDB ID: | retro_vpac_271 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | GeneScaffold_3534:1286986..1287259(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSVPAG00000002529 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 84.62 % |
Parental protein coverage: | 98.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
MAK.TKK.GI..KYGT.YGASL.KMVKK.E.SQHAK.TCS.CGKT.MKRRAV.IWHCGSCMKTVAG.AWT | |
Retrocopy | MAKCTKKIGIINKYGTHYGASLQKMVKKTEVSQHAKDTCSSCGKTRMKRRAVCIWHCGSCMKTVAGDAWT |
Parental | YNTTSAVTVKSAIRRLKELKD |
YNTTSAVTVKSAIRRLK.LKD | |
Retrocopy | YNTTSAVTVKSAIRRLKALKD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |