RetrogeneDB ID: | retro_tbel_141 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1274:383115..383369(+) | ||
Located in intron of: | ENSTBEG00000002660 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 72.22 % |
Parental protein coverage: | 94.57 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | KKVGIV-GKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTV-AGGAWTYNT |
KKV.I..GKYGT.YGAS..KMVKKI.ISQH.KY.CS.CGK.KMKR.AVGI.HC.SCMK.V..GG...Y.. | |
Retrocopy | KKVSIL<GKYGTHYGASILKMVKKIKISQHTKYSCS-CGKIKMKR*AVGI*HCYSCMKMV<SGGVCMY-V |
Parental | TSAVTV-KSAIRRLKELKDQ |
TSAVT..KS.IRRLKELKDQ | |
Retrocopy | TSAVTI>KSTIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |