RetrogeneDB ID: | retro_tbel_3022 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_126628:383095..383369(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 79.79 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAKRTKKVGIVG-KYGTRYGA-SLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGA |
MAK.T.K.GI.G.KYG..YG..SL.KMVKKIEI.QH.KYT.S.CGKTKMKR.AVGIWHCGSC.KTV..GA | |
Retrocopy | MAKHTRKDGIMG<KYGIYYGS<SLCKMVKKIEIIQHNKYTSSLCGKTKMKRWAVGIWHCGSCRKTVVSGA |
Parental | WTYNTTSAVTVKSAIRRLKELKDQ |
WTY.TTSAVTVKSAIRRLKELKDQ | |
Retrocopy | WTYTTTSAVTVKSAIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |