RetrogeneDB ID: | retro_shar_197 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL834617.1:408523..408800(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSSHAG00000013417 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 69.89 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGA-W |
M...TKKV.IV.KYG..Y..SL.KMVKKIEISQH.K.T.SF..KTKMK...V.IWHCGSC.KTVAG.A.W | |
Retrocopy | MVNCTKKVRIVDKYGIHYNMSLIKMVKKIEISQHVKKTGSFYCKTKMKGQTVSIWHCGSCKKTVAGAA>W |
Parental | TYNTTSAVTVKSAIRRLKELKDQ |
..NT.SAV.V.SAI.RLKELKDQ | |
Retrocopy | I*NTNSAVVVRSAIIRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |