RetrogeneDB ID: | retro_tbel_4524 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_88296:3363..3639(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 80.85 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIW-HCGSCMKTVAG-GA |
MAK..KK.GIVGK.GT.YGASL.K.VKKI.ISQHAKY.CSFCGKTKMKRRAVG...H..SCMKT.AG.GA | |
Retrocopy | MAKCKKKIGIVGKHGTHYGASLWKTVKKI*ISQHAKYICSFCGKTKMKRRAVGVC<HRDSCMKTTAG>GA |
Parental | WTYNTTSAVTVKSAIRRLKELKDQ |
W.Y.TTSAVTVKSAIRRLKELKDQ | |
Retrocopy | WIYTTTSAVTVKSAIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |