RetrogeneDB ID: | retro_tbel_4117 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_67845:1272..1543(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 74.19 % |
Parental protein coverage: | 98.91 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKI-EISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAW |
MAK.TK.V...GKY.T...AS..KMVKK..E.SQHAKYTCSFCGKTKMKRRAVGIWHCGSCM..V..GAW | |
Retrocopy | MAKHTKQVSSIGKYKTHCEASFWKMVKKL<ETSQHAKYTCSFCGKTKMKRRAVGIWHCGSCMNMVVRGAW |
Parental | TYNTTSAVTV-KSAIRRLKELKD |
..NT.SAVTV.KS.I.RLKELKD | |
Retrocopy | IHNTPSAVTV<KSSIWRLKELKD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |