RetrogeneDB ID: | retro_tbel_3955 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_44232:2221..2496(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 91.4 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEIS-QHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAW |
MAKRTKKVGIVGKY.TRYGASL.KMVKKIEIS.QH.KYTCSFCGKTKMKR..VGIWHCGSCMKTVAGGA. | |
Retrocopy | MAKRTKKVGIVGKYRTRYGASLQKMVKKIEIS<QHVKYTCSFCGKTKMKRHVVGIWHCGSCMKTVAGGA* |
Parental | TYNTTSAVTVKSAIRRLKELKDQ |
TYNTTSAVTVKSAIR.LKELKDQ | |
Retrocopy | TYNTTSAVTVKSAIRKLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |