RetrogeneDB ID: | retro_shar_460 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849566.1:1062795..1063071(+) | ||
Located in intron of: | ENSSHAG00000012159 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSSHAG00000013417 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 62.37 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVG-IWHCGSCMKTVAGGAW |
M.K..KK..I...YGT.Y..SLRKM.K.IEI.QHAKYT..FCGK.KM.R......WHCG..MKTVAG..W | |
Retrocopy | MTK*IKKITIFD*YGTHY-VSLRKMMKNIEIRQHAKYTYFFCGKAKMNR*TISSFWHCGFYMKTVAGSTW |
Parental | TYNTTSAVTVKSAIRRLKELKDQ |
TYN..S.VTV...I.RLKELKDQ | |
Retrocopy | TYNVISKVTVNYTI*RLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |