RetrogeneDB ID: | retro_shar_246 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL834801.1:1145281..1145551(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSSHAG00000013417 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 56.52 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
MAK.TKKV.I.G.....YG.SLRK..KK.EISQH.K...SFC.K...K..A.G..HCGSC..TVAG.A.. | |
Retrocopy | MAKCTKKVRIDGRHVIHYGVSLRKIMKKMEISQHVKSPYSFCNKAQIKK*AMGTLHCGSC--TVAGDAYI |
Parental | YNTTSAVTVKSAIRRLKELKDQ |
.N..S.V.VK...R.LKELK.Q | |
Retrocopy | CNMISVVIVKYSMRKLKELKGQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |