RetrogeneDB ID: | retro_tbel_590 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2507:1247213..1247488(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 79.57 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
MAKRTK.VG.VGKY.TRYGASL..MVKKIEIS.H...TC.FCG..KMKRRAVGIWHCGSCMK.VA.GAWT | |
Retrocopy | MAKRTKRVGMVGKYRTRYGASLWTMVKKIEISHHPEDTCFFCG*AKMKRRAVGIWHCGSCMKMVARGAWT |
Parental | Y-NTTSAVTVKSAIRRLKELKDQ |
Y...T.AVT.KSAIRRLKELKDQ | |
Retrocopy | Y<HPTLAVTAKSAIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |