RetrogeneDB ID: | retro_tbel_1992 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_614:64486..64728(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 75.61 % |
Parental protein coverage: | 88.04 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | VGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVK |
..K.GT.YGASL.KMVKK..ISQHAKYTCS..GKTKMKR.A.G.WH.GSC.KTV.GGAWTYNTT.A.TVK | |
Retrocopy | IDKHGTCYGASLQKMVKKSKISQHAKYTCSLGGKTKMKR*ASGAWHYGSCTKTVTGGAWTYNTTLAITVK |
Parental | SAIRR-LKELKD |
SAIRR...ELKD | |
Retrocopy | SAIRR<AEELKD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |