RetrogeneDB ID: | retro_tbel_790 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3026:255949..256222(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 75.79 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKK-IEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAW |
M.K.TKKV......GTRYGASLRK..KK..EISQ.AK.TCSFC.KTKM.RRAVG.WHCG.CMKTVAGGAW | |
Retrocopy | MVKCTKKVNMART*GTRYGASLRKTIKK<VEISQRAKCTCSFCDKTKMNRRAVGVWHCGFCMKTVAGGAW |
Parental | TYNTTS-AVTVKSAIRRLK-ELKDQ |
TY.TTS.AVTVKS.IRRL..ELKDQ | |
Retrocopy | TYTTTS<AVTVKSTIRRLR<ELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |