RetrogeneDB ID: | retro_tbel_4382 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_79735:4130..4411(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 75.79 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
M.K.T.KVGIVGKYGT.Y.ASL...VKKIEISQH.K..CSFCGKTKMKR.A..IWH..S.MK.VAGGAW. | |
Retrocopy | MSKHTQKVGIVGKYGTYYCASLCTTVKKIEISQHVK*SCSFCGKTKMKRQALRIWHGSSYMKMVAGGAWI |
Parental | YNT-TSAVTVKS--AIRRLKELKDQ |
YNT.TSAV.VKS..AIRRLKELKDQ | |
Retrocopy | YNT<TSAVIVKSPFAIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |