RetrogeneDB ID: | retro_tbel_1352 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4474:125006..125269(+) | ||
Located in intron of: | ENSTBEG00000007649 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 74.16 % |
Parental protein coverage: | 95.65 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAKRTKKVGIVGKYG-TRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAW |
.AK.TKKV.I.GKYG.T.YGASL.KM.KK.EISQHA.YTCSF..KTKMKRRAVG.W..GSCMK.VAGGAW | |
Retrocopy | IAKCTKKVSIIGKYG<TSYGASLWKMAKKTEISQHATYTCSF*DKTKMKRRAVGTWYYGSCMKIVAGGAW |
Parental | TYNTTSAVTVKSAIRRLKE |
TY.TT....V.SAIRRLK. | |
Retrocopy | TYSTTLPIRVRSAIRRLKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |