RetrogeneDB ID: | retro_opri_1060 | ||
Retrocopylocation | Organism: | Southern American pika (Ochotona princeps) | |
Coordinates: | scaffold_64099:2490..2681(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOPRG00000015425 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSOPRG00000004436 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 90.77 % |
Parental protein coverage: | 69.57 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | IEISQHAKYTCSFCGKT-KMKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKDQ |
IEIS.H.KYTCSF.GKT.KMKRRAVGIW.CGSCMKTVAGGAWTYNTTSA.TVKSAIRRLKELKDQ | |
Retrocopy | IEISEHTKYTCSFGGKT<KMKRRAVGIWYCGSCMKTVAGGAWTYNTTSAITVKSAIRRLKELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |