RetrogeneDB ID: | retro_tbel_1168 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3987:258125..258393(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 75.53 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRR-AVGIWHCGSCMKTVAGGAW |
MA..TK.VG..GKY.T..GASL.KM.KK.E.SQHAK.TCSFCGKTKMKRR.AVG.WHCGSC.KT.AGGAW | |
Retrocopy | MANHTK-VGLIGKYRTHCGASLQKM-KKSEMSQHAKNTCSFCGKTKMKRR<AVGTWHCGSCVKTEAGGAW |
Parental | TYNTTSAVTVKSAIRRLK-ELKDQ |
TY.TTSAVTV.S.IR.L..ELKDQ | |
Retrocopy | TYTTTSAVTVQSSIRSLR<ELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |