RetrogeneDB ID: | retro_tbel_1471 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4828:345716..345990(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSTBEG00000007409 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 80.85 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWT |
M...TK.VGI.GK..TRYGASLRKMV.K.EISQHAK.TCSFCGKT.M.RRAVG.WHCGS.MKTVAGGAWT | |
Retrocopy | MV*HTKRVGIIGKNRTRYGASLRKMVRKTEISQHAKCTCSFCGKTRMNRRAVGVWHCGSFMKTVAGGAWT |
Parental | YNTTS-AVTVKSAIRRLK-ELKDQ |
Y.TTS.AVTVKSAIRRL..ELKDQ | |
Retrocopy | YTTTS<AVTVKSAIRRLR<ELKDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |