RetrogeneDB ID: | retro_tbel_1088 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3809:154821..155237(-) | ||
Located in intron of: | ENSTBEG00000004529 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.14 % |
Parental protein coverage: | 90.2 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNPFVTSD.SKNRKRHFNAPSHI.RKIMSS.LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQ.IGKV | |
Retrocopy | MKFNPFVTSD*SKNRKRHFNAPSHI*RKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQRIGKV |
Parental | VQVYRKKYVIYIERVQRE-KANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKKQS |
V.VYRKKYVIY.ERVQ.E.KANGT.VHVGIHPS.VVITRLKLDKD.KKILE.KAKSRQVGKEK...K... | |
Retrocopy | VRVYRKKYVIYMERVQQE<KANGTAVHVGIHPSEVVITRLKLDKDHKKILEWKAKSRQVGKEKGKYKEET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |