RetrogeneDB ID: | retro_tbel_446 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2095:451152..451528(-) | ||
Located in intron of: | ENSTBEG00000004837 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.5 % |
Parental protein coverage: | 81.05 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | KIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIE-RVQREKANGTTVH |
K.MSS.LSKE.RQKY.V..MPI.K.DEVQ.V.GHYKGQQ.G..V.V.RK..VIYI..RVQ.E.A.GTT.. | |
Retrocopy | KVMSSPLSKEQRQKYHV**MPIQKKDEVQFVQGHYKGQQTGHAVRVHRKRCVIYIR<RVQWERAHGTTAR |
Parental | VGIHPSKVVIT-RLKLDKDRKKILERKAKSRQVGKEK-NIRKKQSRRCRSKIILYAIL |
VG..PSKVVIT...KLDKD..K.LE.KAKS....K...NI.K.Q.R.CRS..ILY..L | |
Retrocopy | VGFQPSKVVIT<GAKLDKDCEKSLEWKAKSP*EEKTRANIKKRQLR*CRSTRILYTQL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |