RetrogeneDB ID: | retro_tbel_2005 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_640:51349..51813(-) | ||
Located in intron of: | ENSTBEG00000009997 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.15 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSL-SKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKF.PF.TSD.S.N.KRHF.APSHI.RKI.SS..SKELRQKYNVRS.PI.KDDEVQ.VRGH..GQ..GKV | |
Retrocopy | MKFIPFMTSD*SENCKRHFSAPSHICRKILSSPHSKELRQKYNVRSKPIQKDDEVQLVRGHCRGQHSGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHV-GIHPSKVVITRLKLDKDRKKILERKAK-SRQVGKEKNIRKKQ |
VQVY.KK.VIY.ERVQ.EKANGTTVHV.GI.P.KVVITRLKL.KD..K.L..K........K...I.KKQ | |
Retrocopy | VQVYGKKSVIYMERVQWEKANGTTVHV<GILPNKVVITRLKLNKDPEKSLNGKPSLTK*EWKRADIKKKQ |
Parental | SRRCRSKIILYAILIK |
.RRCRSKIILY..LIK | |
Retrocopy | LRRCRSKIILYTVLIK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |