RetrogeneDB ID: | retro_tbel_1928 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_6017:11601..12058(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.45 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIM-SSLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNPF.TSD.SKN.KRH.N.PSHI......S.LSKEL..KYNV.S..I.KDDEVQVV.GHYKG..IGKV | |
Retrocopy | MKFNPFLTSDQSKNHKRHLNVPSHILGDYI>SPLSKEL--KYNVQSVSIQKDDEVQVV*GHYKGHKIGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKKQS- |
VQVYRKK.VIY.E..Q.EKANGTTVH.G..PSKVVITR.KLDKD.KKILE.KAKS..V..EK...K.... | |
Retrocopy | VQVYRKKHVIYTEQAQKEKANGTTVHAGVRPSKVVITRIKLDKDGKKILEQKAKSHHVVQEKGKCKEETI |
Parental | RRCRSKIILYAILIK |
......IILY...IK | |
Retrocopy | EKMQE*IILYIPFIK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |