RetrogeneDB ID: | retro_tbel_4416 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_8185:52086..52503(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.05 % |
Parental protein coverage: | 90.2 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNPFVTSDRSKNRKRHFNAPSH..RKIMSS.LSKELRQKYN..SMPIRKDDE.QVV.GHYKGQQIGKV | |
Retrocopy | MKFNPFVTSDRSKNRKRHFNAPSHF*RKIMSSPLSKELRQKYNMQSMPIRKDDEIQVVQGHYKGQQIGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKKQS |
VQVYRKKYVIYIERVQ.EKANGTTVHVGIHPS.VVITRLKLDKD.KKILE.KAKS.QVGKEK...K... | |
Retrocopy | VQVYRKKYVIYIERVQWEKANGTTVHVGIHPSLVVITRLKLDKDHKKILEQKAKSHQVGKEKGKYKEET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |