RetrogeneDB ID: | retro_tbel_3711 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_149068:46770..47241(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.3 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMS-SLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MKFNPFVTSD.SKN.KRH.NAPSHI.RKIMS..L.K.LRQKYNV.SMPI.KDDEVQVV.GHYK.QQIGKV | |
Retrocopy | MKFNPFVTSD*SKNLKRHLNAPSHIHRKIMSFPLLKGLRQKYNVQSMPIQKDDEVQVVQGHYKDQQIGKV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLD----KDRKKILERKAKSRQVGKEKNIRK |
VQVYRKKYVIYIERVQ.EKA.GT.VHV.IHPSKVV..RL.LD.......K..L..K.............. | |
Retrocopy | VQVYRKKYVIYIERVQQEKAKGTIVHVSIHPSKVV--RLSLD*NWTETAKRSLNEKPSLAK*ERKRANIR |
Parental | KQSRR-CRSKIILYAILIK |
K...R.C.SKIILY..L.K | |
Retrocopy | KKQLRRCGSKIILYTVLSK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |