RetrogeneDB ID: | retro_tbel_2053 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_843:1373706..1374120(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.81 % |
Parental protein coverage: | 89.54 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
.KFNPF.TSDRSKN.K.HFNAPSH..RKIMSS.LSKEL.QK.NVRSMP..KDDEVQVV.GHYKGQQIG.V | |
Retrocopy | VKFNPFMTSDRSKNCKCHFNAPSHLHRKIMSSPLSKELQQK*NVRSMPVHKDDEVQVVQGHYKGQQIGRV |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKNIRKKQ |
.QV.RKK.VIY.ERVQR.KA.GTTVHVGIHPSK.VITRLKLDK...KILE.KAKS.QVG..K...K.. | |
Retrocopy | LQVSRKKCVIYMERVQR*KAVGTTVHVGIHPSKGVITRLKLDKTWRKILEHKAKS*QVGEKKGKYKEE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |