RetrogeneDB ID: | retro_tbel_573 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_246:174040..174426(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.15 % |
Parental protein coverage: | 84.97 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | HIRRKIMSSLSKELRQKYNVRSMPI-RKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGT |
H........LSKELRQKYN..SMPI.RKDD..QVVRGHYKGQQI.KVVQVYRKKY.IYIE.VQ.EKANG. | |
Retrocopy | HLKEDYVFPLSKELRQKYNMQSMPI<RKDDAIQVVRGHYKGQQIDKVVQVYRKKYIIYIE*VQWEKANGR |
Parental | TVHVG-IHPSKVVITRLKLDKDRKKI-LERKAK-SRQVGKEKNIRKKQSRRCRSKIILYAILIK |
.VHVG.IHPSKVVITRL...KD.KKI.L.RK........K..N.RKKQ.RRCRSKIILY..LIK | |
Retrocopy | AVHVG<IHPSKVVITRL--NKDHKKI>LNRKPSLAK*ERKRANMRKKQLRRCRSKIILYTVLIK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |