RetrogeneDB ID: | retro_tbel_4480 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_85121:3598..3947(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 60.32 % |
Parental protein coverage: | 77.78 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 7 |
Parental | RSKNRKRHFNA-PSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEV-QVVRGHYKGQQIGKVVQVYRKKY |
...NR.RHF.A...H..RKIMS..LSKELRQKY...S.PIRK...V.Q.VRGH..GQ.IG.VV.V.RKK. | |
Retrocopy | KQENRNRHFSA<TPHTGRKIMSP>LSKELRQKYKMPSVPIRKHRDV<QAVRGHGEGQHIGRVVRVSRKKF |
Parental | VIYIE-RVQRE-KANGTTVHVGI-HPSKVVITRLKLDKD-RKKILERKAKSRQVGK |
V...E...QRE..AN..TVHVG...PSK.VITR.K.DKD..KKI.E.KAK.RQ.GK | |
Retrocopy | VVSTE<AAQRE<RAN-RTVHVGT<SPSKAVITRPKPDKD<HKKIIEPKAKPRQAGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |