RetrogeneDB ID: | retro_tbel_2033 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_75:122306..122648(-) | ||
Located in intron of: | ENSTBEG00000014288 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.14 % |
Parental protein coverage: | 73.86 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MKFNPF-VTSDRSKNRKRHFNAPSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGK |
MKFN.F.VTS..SKN.KRHF...S.I.RKI.SS.L.K..RQKYNV.S..IRKDDEVQVV.GHYKGQQIGK | |
Retrocopy | MKFNLF>VTSV*SKNCKRHFSGLSYICRKIISSPLYKKRRQKYNVQSTSIRKDDEVQVVCGHYKGQQIGK |
Parental | VVQVYRKKYVI-YIERVQREKANGTTVHVGIHPSKVVITRLKLDKD |
.VQVYRK.YVI.Y.E..Q.EKANGT.V.VGI.PSKV.ITRLKLDKD | |
Retrocopy | AVQVYRKNYVI<YNEQLQQEKANGTMVRVGICPSKVDITRLKLDKD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |