RetrogeneDB ID: | retro_tbel_1389 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4573:94073..94539(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.28 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKV |
MK.NPFVTSD..KN.K.HF.APSHIRRKIM.S.LSKEL.QKYNVRSMPIRK...VQVVRGHY.GQ.IGK. | |
Retrocopy | MKYNPFVTSDQNKNHKSHFSAPSHIRRKIMNSPLSKELMQKYNVRSMPIRKNNGVQVVRGHYEGQEIGKA |
Parental | VQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDR-KKILERKAK-SRQVGKEKNIRKKQ |
VQVYRKKYVIY.ERVQ.EKANGTTVHVGI.PSKVVITRLKL.KD..K....RK...S....K..NIRKKQ | |
Retrocopy | VQVYRKKYVIYTERVQWEKANGTTVHVGIPPSKVVITRLKLNKDH>KRSFNRKPSLSK*ERKRANIRKKQ |
Parental | SRRCRSKIILYAILIK |
.RRCRSKIILY..LIK | |
Retrocopy | LRRCRSKIILYTVLIK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |