RetrogeneDB ID: | retro_tbel_3704 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_148912:76235..76697(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000007749 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.13 % |
Parental protein coverage: | 99.35 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | MKFNPF-VTSDRSKNRKRHFNAPSHIRRKIMSS-LSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGK |
.KFNPF...SD.SKN.KRHFNAPSHI.RKIMSS.LSKELRQKYN.RSMPI.KD.EVQVVRGHYKGQQIGK | |
Retrocopy | LKFNPF<LISD*SKNHKRHFNAPSHI*RKIMSSPLSKELRQKYNMRSMPI*KDYEVQVVRGHYKGQQIGK |
Parental | VVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDR-KKILERKAK-SRQVGKEKNIRKK |
V.QVYRKKYVIYIERVQR.KANGTTVHVGIHPSKVVITRLKLDKDR.K..L..K........K..NIRKK | |
Retrocopy | VAQVYRKKYVIYIERVQRGKANGTTVHVGIHPSKVVITRLKLDKDR>KRSLNGKPSLAKKERKRANIRKK |
Parental | QSRRCRSKIILYAILI |
QSRRCRSKII.Y..LI | |
Retrocopy | QSRRCRSKIIIYTVLI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |